new bacterial species discovered in the intestine
The micrographs of the electron microscopic analysis done by Dr Urska Repnik at Kiel University’s Central Microscopy Facility show one of the newly discovered bacteria (A) as a whole bacterium illustrating the shape and size, and (B) as a transverse cross section indicating the ultrastructure of the cell envelope. Credit: Dr Urska Repnik, Central Microscopy Facility, Kiel University

Whether plant, animal or human, living organisms are colonized by a multitude of bacteria. Research findings in recent years show that bacteria not only co-exist with their host, but form mutual interactions in the form of a symbiosis that can benefit both the bacterium and the host.

The sum of a host and its associated microbes in their entirety is referred to by scientists as a metaorganism. Researchers from Kiel University and the Max Planck Institute for Evolutionary Biology in Plön (MPI-EB) are studying their evolutionary history and function.

Bacteroides bacteria occur in large numbers in the microbiota of mammals and also humans. With the two recently discovered strains, which were isolated from the appendix of wild house mice in the animal facility of the MPI-EB, the research group Evolutionary Medicine now hopes to gain new insights.

“One goal with this discovery is to better understand in the long term why bacteria live in and on us. Many of these bacteria are still unknown. We have now gathered very basic knowledge about this type of bacteria and know, for example, from microscopic images what these bacteria look like and what size they are,” says Dr. Daniel Unterweger, research group leader at the MPI for Evolutionary Biology and Kiel University.

The discovery came unexpectedly. To determine the identity of newly isolated bacteria, modern sequencing methods are used to decode the bacterial genome and match it with known bacterial species. “It was a big surprise that the bacteria we isolated did not match any known bacterial species in the database and accordingly did not yet have a name,” says first author Dr. Hanna Fokt, postdoctoral researcher at the MPI-EB, describing the special moment when it became clear that she had discovered a new bacterial species.

The results of subsequent genomic and phenotypic analyses suggest that the two strains described here represent a new species of the genus Bacteroides. It is possible that these new bacterial strains could be present not only in mice but also in other mammals, and therefore promise a better understanding of the evolution of the genus Bacteroides as an important member of a healthy mammalian microbiota. The composition of this microbiota and its interactions with host cells are the focus of the research interest.

The first bacterial species belonging to Bacteroides was described at the end of the 19th century and named Bacteroides fragilis. Since then, a total of 35 different Bacteroides species have been isolated, characterized and validated. Improved technical possibilities of genome sequencing today make it possible to determine the relationship of bacteria very precisely. Cultures of the bacterial species are stored in the German Collection of Microorganisms and Cell Cultures in Braunschweig, among other places, and are thus accessible to researchers worldwide.

The research was published in Archives of Microbiology. More information: Hanna Fokt et al, Bacteroides muris sp. nov. isolated from the cecum of wild-derived house mice, Archives of Microbiology (2022). DOI: 10.1007/s00203-022-03148-6 Provided by Kiel University Citation: New bacterial species discovered in the intestine (2022, September 29) retrieved 29 September 2022 from This document is subject to copyright. Apart from any fair dealing for the purpose of private study or research, no part may be reproduced without the written permission. The content is provided for information purposes only.


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